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2024-10-21
Rapid identification of the predominant azole-resistant genotype in Candida tropicalis
FEMS Yeast Research. 2024 Oct 21;24:Article number foae025.
2022-09
A predominant genotype of azole-resistant Candida tropicalis clinical strains
Lancet Microbe. 2022 Sep;3,(9):Article number e646.
2019-07
Inter partes review: Patent killer no more?
Trends in Biotechnology. 2019 Jul:37(7):680-683.
2018-10
China: The next pharmacy of the world?
Trends in Pharmacological Sciences. 2018 Oct;39(10):843-848.
2017-11
Patent trend and competitive analysis of cancer immunotherapy in the United States
Human Vaccines and Immunotherapeutics. 2017 Nov;13(11):2583-2593.
2017-04-03
NMD Classifier: A reliable and systematic classification tool for nonsense-mediated decay events
PLoS ONE. 2017 Apr 03;12(4):Article number e0174798.
2017-04
The challenges of joint performance to method patents
Expert Opinion on Therapeutic Patents. 2017 Apr;27(4):393-399.
2016-11
Invalidation of atorvastatin patent highlights complex Chinese patent law
Trends in Pharmacological Sciences. 2016 Nov;37(11):883-886.
2016-10
Divided infringement in the limelight of the patent battle field
Trends in Biotechnology. 2016 Oct;34(10):771-773.
2016-05-19
Non-small-cell lung cancer cells combat epidermal growth factor receptor tyrosine kinase inhibition through immediate adhesion-related responses
OncoTargets and Therapy. 2016 May 19;9:2961-2973.
2016-04-18
NF-kappaB-driven suppression of FOXO3a contributes to EGFR mutation-independent gefitinib resistance
Proceedings of the National Academy of Sciences of the United States of America. 2016 Apr 18;113(18):E2526-E2535.
2016-01-14
Functional divergence and convergence between the transcript network and gene network in lung adenocarcinoma
Oncotargets and Therapy. 2016 Jan 14;9:335-347.
2015-10
Triple-layer dissection of the lung adenocarcinoma transcriptome - regulation at the gene, transcript, and exon levels
Oncotarget. 2015 Oct;6(30):28755-28773.
2015-04-23
Genome sequences of three helicobacter pylori strains from patients with gastric mucosa-associated lymphoid tissue lymphoma
Genome Announcements. 2015 Apr 23;3(2):Article number e00229-15
2015-01
Alternative RNA structure-coupled gene regulations in tumorigenesis
International Journal of Molecular Sciences. 2015 Jan;16(1):452-475.
2014-12-10
Functional implications of RNA splicing for human long intergenic noncoding RNAs
Evolutionary Bioinformatics. 2014 Dec 10;10:219-228.
2014-11
Assessing the relationship of evolutionary rates and functional variables by mixture estimating equations
Statistics and Probability Letters. 2014 Nov;94:248-256.
2014-07
Are all of the human exons alternatively spliced?
Briefings in Bioinformatics. 2014 Jul;15(4):542-551.
2014-06-27
Pros and cons of the tuberculosis drugome approach – An empirical analysis
PLoS ONE. 2014 Jun 27;9(6):Article number e100829.
2014-06-25
The evolution of the coding exome of the Arabidopsis species - the influences of DNA methylation, relative exon position, and exon length
BMC Evolutionary Biology. 2014 Jun 25;14:Article number 145.
2014-02
DNA methylation is associated with an increased level of conservation at nondegenerate nucleotides in mammals
Molecular Biology and Evolution. 2014 Feb;31(2):387-396.
2013-11
Draft genome sequence of NDM-1-producing klebsiella pneumoniae clinical isolate 303K
Genome Announcements. 2013 Nov;1(6):Article number e01069-13.
2013-04
The evolutionary landscape of the Mycobacterium tuberculosis genome
Gene. 2013 Apr;518(1):187-193.
2012-11-01
Selective constraint on the upstream open reading frames that overlap with coding sequences in animals
PLoS ONE. 2012 Nov 1;7(11):Article number e48413.
2012-10
Assessing determinants of exonic evolutionary rates in mammals
Molecular Biology and Evolution. 2012 Oct;29(10):3121-3129.
2012-09-25
Position-dependent correlations between DNA methylation and the evolutionary rates of mammalian coding exons
Proceedings of the National Academy of Sciences of the United States of America. 2012 Sep 25;109(39):15841-15846.
2012-07-04
Determinants of exon-level evolutionary rates in arabidopsis species
Evolutionary Bioinformatics. 2012 Jul 04;2012(8):389-415.
2012-07
GEMSiRV: A software platform for GEnome-scale metabolic model simulation, reconstruction and visualization
Bioinformatics. 2012 Jul;28(13):1752-1758.
2012-05
LDGIdb: A database of gene interactions inferred from long-range strong linkage disequilibrium between pairs of SNPs
BMC Research Notes. 2012 May;5(1):Article number 212.
2012-02
Selective constraint on human pre-mRNA splicing by protein structural properties
Genome Biology and Evolution. 2012 Feb;4(9):966-975.
2012-01
Independent effects of alternative splicing and structural constraint on the evolution of mammalian coding exons
Molecular Biology and Evolution. 2012 Jan;29(1):187-193.
2011-09
MrBac: A web server for draft metabolic network reconstructions for bacteria
Bioengineered Bugs. 2011 Sep;2(5):284-287.
2011-08
The plausible reason why the length of 5' untranslated region is unrelated to organismal complexity
BMC Research Notes. 2011 Aug;4:Article number 312.
2011-07-05
Exploring the selective constraint on the sizes of insertions and deletions in 5 ' untranslated regions in mammals
BMC Evolutionary Biology. 2011 Jul 5;11(1):Article number 192.
2011-04
An experimentally validated genome-scale metabolic reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228
Journal of Bacteriology. 2011 Apr;193(7):1710-1717.
2011-01
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2
BMC Systems Biology. 2011 Jan;5:Article number 8.
2010-11
Contrasting substitution patterns between HA proteins of avian and human influenza viruses: Implication for monitoring human influenza epidemics
Vaccine. 2010 Nov;28(50):7890-7896.
2010-11
Phosphorylated and nonphosphorylated serine and threonine residues evolve at different rates in mammals
Molecular Biology and Evolution. 2010 Nov;27(11):2548-2554.
2010-08
Gene family size conservation is a good indicator of evolutionary rates
Molecular Biology and Evolution. 2010 Aug;27(8):1750-1758.
2009-08
CAPIH: a Web interface for comparative analyses and visualization of host-HIV protein-protein interactions
BMC Microbiology. 2009 Aug;9:Article number 164.
2009-06
CNVVdb: A database of copy number variations across vertebrate genomes
Bioinformatics. 2009 Jun;25(11):1419-1421.
2009
Scanning for the signatures of positive selection for human-specific insertions and deletions
Genome Biology and Evolution. 2009:415-419.
2008-07
Identification and analysis of ancestral hominoid transcriptome inferred from cross-species transcript and processed pseudogene comparisons
Genome Research. 2008 Jul;18(7):1163-1170.
2007-09
Different alternative splicing patterns are subject to opposite selection pressure for protein reading frame preservation
BMC Evolutionary Biology. 2007 Sep;7:Article Number 179.
2007-07
INDELSCAN: a web server for comparative identification of species-specific and non-species-specific insertion/deletion events
Nucleic Acids Research. 2007 Jul;35(Suppl. S):W633-W638.
2007-07
Opposite evolutionary effects between different alternative splicing patterns
Molecular Biology and Evolution. 2007 Jul;24(7):1443-1446.
2007-03
Plant gene and alternatively spliced variant annotator. A plant genome annotation pipeline for rice gene and alternatively spliced variant identification with cross-species expressed sequence tag conservation from seven plant species
Plant Physiology. 2007 Mar;143(3):1086-1095.
2007-01
Human-specific insertions and deletions inferred from mammalian genome sequences
Genome Research. 2007 Jan;17(1):16-22.
2006-05-19
The effects of multiple features of alternatively spliced exons on the KA/KSratio test
BMC Bioinformatics. 2006 May;7: Article number 259.
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